Whitmire Publications
Eleven strategies for making reproducible research and open science training the norm at research institutions
Kohrs, Friederike E, Auer, Susann, Bannach-Brown, Alexandra, Fiedler, Susann, Haven, Tamarinde Laura, Heise, Verena, Holman, Constance, Azevedo, Flavio, Bernard, René, Bleier, Armin, Bössel, Nicole, Cahill, Brian Patrick, Castro, Leyla Jael, Ehrenhofer, Adrian, Eichel, Kristina, Frank, Maximillian, Frick, Claudia, Friese, Malte, Gärtner, Anne, Gierend, Kerstin, Grüning, David Joachim, Hahn, Lena, Hülsemann, Maren, Ihle, Malika, Illius, Sabrina, König, Laura, König, Matthias, Kulke, Louisa, Kutlin, Anton ... Weissgerber, Tracey L (2023). Eleven strategies for making reproducible research and open science training the norm at research institutions. eLife, 12 e89736. doi: 10.7554/elife.89736
Thermosensory thalamus: parallel processing across model organisms
Leva, Tobias M. and Whitmire, Clarissa J. (2023). Thermosensory thalamus: parallel processing across model organisms. Frontiers in Neuroscience, 17 1210949, 1210949. doi: 10.3389/fnins.2023.1210949
Brain-wide connectivity map of mouse thermosensory cortices
Bokiniec, Phillip, Whitmire, Clarissa J., Leva, Tobias M. and Poulet, James F. A. (2023). Brain-wide connectivity map of mouse thermosensory cortices. Cerebral Cortex, 33 (8), 4870-4885. doi: 10.1093/cercor/bhac386
Deep tissue scattering compensation with three-photon F-SHARP
erlage, Caroline, Tantirigama, Malinda L. S., Babot, Mathias, Di Battista, Diego, Whitmire, Clarissa, Papadopoulos, Ioannis N., Poulet, James F. A., Larkum, Matthew and Judkewitz, Benjamin (2021). Deep tissue scattering compensation with three-photon F-SHARP. Optica, 8 (12), 1613-1619. doi: 10.1364/OPTICA.440279
Inferring thalamocortical monosynaptic connectivity in vivo
Liew, Yi Juin, Pala, Aurélie, Whitmire, Clarissa J., Stoy, William A., Forest, Craig R. and Stanley, Garrett B. (2021). Inferring thalamocortical monosynaptic connectivity in vivo. Journal of Neurophysiology, 125 (6), 2408-2431. doi: 10.1152/jn.00591.2020
Thalamic state influences timing precision in the thalamocortical circuit
Whitmire, Clarissa J., Liew, Yi Juin and Stanley, Garrett B. (2021). Thalamic state influences timing precision in the thalamocortical circuit. Journal of Neurophysiology, 125 (5), 1833-1850. doi: 10.1152/jn.00261.2020
Primary Tactile Thalamus Spiking Reflects Cognitive Signals
Waiblinger, Christian, Whitmire, Clarissa J., Sederberg, Audrey, Stanley, Garrett B. and Schwarz, Cornelius (2018). Primary Tactile Thalamus Spiking Reflects Cognitive Signals. The Journal of Neuroscience, 38 (21), 4870-4885. doi: 10.1523/jneurosci.2403-17.2018
Design strategies for dynamic closed-loop optogenetic neurocontrolin vivo
Bolus, M. F., Willats, A. A., Whitmire, C. J., Rozell, C. J. and Stanley, G. B. (2018). Design strategies for dynamic closed-loop optogenetic neurocontrolin vivo. Journal of Neural Engineering, 15 (2) 026011, 1-18. doi: 10.1088/1741-2552/aaa506
Thalamic state control of cortical paired-pulse dynamics
Whitmire, Clarissa J., Millard, Daniel C. and Stanley, Garrett B. (2017). Thalamic state control of cortical paired-pulse dynamics. Journal of Neurophysiology, 117 (1), 163-177. doi: 10.1152/jn.00415.2016
Rapid sensory adaptation redux: a circuit perspective
Whitmire, Clarissa J. and Stanley, Garrett B. (2016). Rapid sensory adaptation redux: a circuit perspective. Neuron, 92 (2), 298-315. doi: 10.1016/j.neuron.2016.09.046
Directional acuity of whole-body perturbations during standing balance
Puntkattalee, M. Jane, Whitmire, Clarissa J., Macklin, Alix S., Stanley, Garrett B. and Ting, Lena H. (2016). Directional acuity of whole-body perturbations during standing balance. Gait and Posture, 48, 77-82. doi: 10.1016/j.gaitpost.2016.04.008
Information coding through adaptive gating of synchronized thalamic bursting
Whitmire, Clarissa J., Waiblinger, Christian, Schwarz, Cornelius and Stanley, Garrett B. (2016). Information coding through adaptive gating of synchronized thalamic bursting. Cell Reports, 14 (4), 795-807. doi: 10.1016/j.celrep.2015.12.068
Electrical and Optical Activation of Mesoscale Neural Circuits with Implications for Coding
Millard, Daniel C., Whitmire, Clarissa J., Gollnick, Clare A., Rozell, Christopher J. and Stanley, Garrett B. (2015). Electrical and Optical Activation of Mesoscale Neural Circuits with Implications for Coding. The Journal of Neuroscience, 35 (47), 15702-15715. doi: 10.1523/jneurosci.5045-14.
Waiblinger, Christian, Brugger, Dominik, Whitmire, Clarissa J., Stanley, Garrett B. and Schwarz, Cornelius (2015). Support for the slip hypothesis from whisker-related tactile perception of rats in a noisy environment. Frontiers in Integrative Neuroscience, 9 (OCT) 53, 1-11. doi: 10.3389/fnint.2015.00053
Optogenetic feedback control of neural activity
Newman, Jonathan P., Fong, Ming-fai, Millard, Daniel C., Whitmire, Clarissa J., Stanley, Garrett B. and Potter, Steve M. (2015). Optogenetic feedback control of neural activity. eLife, 4 (JULY 2015) e07192, 1-24. doi: 10.7554/elife.07192
Shephard, Clarissa J. and Stanley, Garrett B. (2014). The needle in the haystack. Nature Neuroscience, 17 (6), 752-753. doi: 10.1038/nn.3730